Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002321.1 Kokia drynarioides strain JFW-HI SEQ_114367, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  146625

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19773--19870
25
3.9
25
82
8
101
23
5
12
59
1.53
21545--21618
12
6.6
12
74
13
50
70
20
6
2
1.23
21525--21618
44
2.1
44
82
3
109
68
21
7
3
1.29
21528--21636
56
1.9
55
81
7
130
67
21
6
4
1.31
21620--21680
21
2.9
21
77
2
68
70
14
4
9
1.31
24043--24092
25
2.0
24
81
11
57
34
14
8
44
1.74
27604--27637
17
2.0
17
88
11
52
70
0
8
20
1.13
34239--34357
62
1.9
62
98
0
229
33
12
20
33
1.90
38312--38354
21
2.0
21
86
0
59
76
6
11
4
1.13
42216--42265
26
1.9
26
84
8
66
54
2
2
42
1.23
42319--42351
16
2.0
17
88
5
50
30
6
12
51
1.63
58353--58415
26
2.4
25
84
7
81
30
1
3
65
1.18
60118--60172
29
1.9
28
81
3
65
25
1
3
69
1.15
64718--64792
29
2.6
29
72
19
75
48
9
14
28
1.75
65292--65319
6
4.7
6
100
0
56
32
35
14
17
1.90
67436--67479
19
2.1
21
84
12
56
38
9
2
50
1.47
67542--67577
19
1.9
19
94
5
65
52
5
5
36
1.48
68211--68248
17
2.2
18
85
4
51
23
0
5
71
1.07
68234--68279
20
2.4
19
82
7
56
15
2
6
76
1.09
70659--70733
39
1.9
39
83
2
98
38
10
18
32
1.85
77478--77515
20
1.9
20
88
0
58
28
21
5
44
1.73
87012--87036
13
1.9
13
100
0
50
88
0
12
0
0.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93489--93523
17
2.1
17
89
10
54
11
17
14
57
1.66
98592--98629
3
12.7
3
94
0
67
65
2
0
31
1.06
99118--99169
12
4.2
12
83
9
68
69
0
13
17
1.19
99120--99175
26
2.2
26
100
0
112
66
0
14
19
1.26
112153--112177
13
1.9
13
100
0
50
44
8
0
48
1.32
112399--112467
31
2.2
31
89
5
104
24
15
13
46
1.82
114396--114457
30
1.9
31
84
15
81
50
8
8
33
1.61
124682--124709
13
2.2
13
100
0
56
25
0
32
42
1.55
126048--126076
6
4.8
6
100
0
58
0
17
0
82
0.66
130625--130664
22
1.9
20
90
10
62
62
0
2
35
1.09
131390--131436
5
9.4
5
95
0
85
38
0
40
21
1.53
141509--141777
29
9.4
27
79
10
227
34
1
24
39
1.65
141479--141790
57
5.5
57
83
9
334
33
2
25
38
1.69
142849--142887
20
2.0
20
89
0
60
30
0
2
66
1.05
143606--143689
17
4.9
17
69
13
66
52
3
2
41
1.31
143614--143680
6
11.5
6
74
16
61
53
1
2
41
1.25
143628--143680
23
2.2
24
87
9
74
52
1
3
41
1.30
144547--144624
38
2.1
38
97
0
147
39
6
7
46
1.58
144562--144620
19
3.1
19
63
18
50
40
6
8
44
1.61

Tables:   1

The End!