Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002349.1 Kokia drynarioides strain JFW-HI SEQ_114411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53681

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33--447
182
2.3
180
87
5
588
31
17
19
31
1.95
1156--1205
14
3.6
14
78
10
57
58
26
0
16
1.38
1141--1186
21
2.2
21
84
0
56
54
23
2
19
1.55
1225--1262
13
2.8
13
85
14
51
42
42
0
15
1.47
4524--4553
3
10.0
3
100
0
60
33
0
0
66
0.92
6453--6511
31
1.9
31
86
3
84
50
5
0
44
1.24
17684--17726
17
2.7
15
85
10
50
32
0
0
67
0.91
17704--17775
9
7.4
9
75
17
56
29
1
1
68
1.07
17712--17755
23
2.0
23
86
4
63
29
0
2
68
1.02
23850--23879
14
2.1
14
100
0
60
30
0
0
70
0.88
25688--25986
86
3.5
86
87
5
437
49
3
5
41
1.43
25985--26027
21
2.0
23
81
9
54
46
2
6
44
1.43
26107--26141
17
2.1
16
89
5
52
48
8
0
42
1.33
31567--31625
23
2.6
23
72
22
61
44
8
5
42
1.57
31895--31931
17
2.2
17
90
9
58
70
0
0
29
0.88
32807--32836
16
1.9
16
93
6
53
40
0
0
60
0.97
35064--35095
12
2.6
13
85
14
50
37
6
0
56
1.25
35741--35783
18
2.4
18
88
0
59
65
4
0
30
1.13
35740--35779
14
2.7
15
84
7
64
62
5
0
32
1.17
36627--36703
29
2.5
31
83
10
97
35
20
3
40
1.71
36670--36856
29
6.4
29
80
5
182
34
20
2
42
1.66
36670--36856
59
3.2
59
81
5
220
34
20
2
42
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41996--42211
60
3.5
61
83
6
233
27
13
16
42
1.86
42149--42306
82
1.9
81
83
3
201
27
20
11
39
1.87
42720--42763
22
2.0
23
86
4
63
29
2
4
63
1.26
43008--43033
2
13.0
2
100
0
52
50
0
50
0
1.00
51210--51280
31
2.3
31
85
0
97
33
14
9
42
1.78
51391--51448
29
2.0
30
82
3
73
46
8
6
37
1.61
52132--52161
3
10.0
3
100
0
60
33
0
0
66
0.92

Tables:   1

The End!