Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01002449.1 Kokia drynarioides strain JFW-HI SEQ_114564, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1963
ACGTcount: A:0.37, C:0.13, G:0.12, T:0.38


Found at i:1322 original size:15 final size:15

Alignment explanation


    Indices: 1302--1334  Score: 66
    Period size: 15  Copynumber: 2.2  Consensus size: 15

       1292 TAACATCTTT

                           
       1302 AATTATTCGTATTGA
          1 AATTATTCGTATTGA

                           
       1317 AATTATTCGTATTGA
          1 AATTATTCGTATTGA

               
       1332 AAT
          1 AAT

       1335 GCTATTATTA


Statistics
Matches: 18,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   18  1.00

ACGTcount: A:0.36, C:0.06, G:0.12, T:0.45


Consensus pattern (15 bp):   
AATTATTCGTATTGA
Done.