Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01002453.1 Kokia drynarioides strain JFW-HI SEQ_114569, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2888
ACGTcount: A:0.32, C:0.19, G:0.17, T:0.33


Found at i:1173 original size:6 final size:6

Alignment explanation


    Indices: 1162--1191  Score: 60
    Period size: 6  Copynumber: 5.0  Consensus size: 6

       1152 TAAAATAAAT

                                              
       1162 AAATAA AAATAA AAATAA AAATAA AAATAA
          1 AAATAA AAATAA AAATAA AAATAA AAATAA

       1192 TTGGGTTGCC


Statistics
Matches: 24,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   24  1.00

ACGTcount: A:0.83, C:0.00, G:0.00, T:0.17


Consensus pattern (6 bp):   
AAATAA

Done.