Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01002466.1 Kokia drynarioides strain JFW-HI SEQ_114599, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 5791
ACGTcount: A:0.34, C:0.17, G:0.14, T:0.35


Found at i:4829 original size:3 final size:3

Alignment explanation


    Indices: 4821--4861  Score: 82
    Period size: 3  Copynumber: 13.7  Consensus size: 3

       4811 CATGTCATGT

                                                                  
       4821 TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TG
          1 TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TG

       4862 TTACCTTAAG


Statistics
Matches: 38,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   38  1.00

ACGTcount: A:0.32, C:0.00, G:0.34, T:0.34


Consensus pattern (3 bp):   
TGA

Done.