Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002472.1 Kokia drynarioides strain JFW-HI SEQ_114612, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  104644

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
547--596
25
2.0
25
100
0
100
44
24
16
16
1.86
3191--3282
41
2.2
41
98
0
175
26
6
29
38
1.81
8002--8026
2
12.5
2
100
0
50
48
0
0
52
1.00
12034--12073
13
3.1
13
100
0
80
30
22
17
30
1.97
14175--14207
7
4.7
7
89
10
50
87
0
12
0
0.53
32636--32749
60
1.9
60
90
1
185
35
7
18
39
1.78
33041--33075
16
2.2
16
89
0
52
28
0
2
68
1.04
40257--40368
38
3.0
38
90
7
194
28
15
0
55
1.46
40254--40362
35
3.0
35
90
7
182
28
14
0
55
1.45
56163--56207
24
1.9
23
86
4
63
51
0
2
46
1.13
56150--56209
24
2.5
24
74
12
61
50
0
1
48
1.11
56151--56246
31
3.1
31
78
15
83
47
1
1
50
1.15
60715--60749
18
1.9
18
88
0
52
11
28
0
60
1.32
77128--77185
30
1.9
30
85
3
80
56
0
1
41
1.09
78214--78269
27
2.1
27
89
0
85
21
35
19
23
1.96
89050--89107
29
2.0
28
86
3
80
48
8
8
34
1.65
96589--96704
56
2.1
54
87
6
164
35
23
18
23
1.96
101062--101101
7
5.7
7
96
0
71
2
42
0
55
1.13
101069--101114
21
2.2
21
84
7
58
0
43
4
52
1.21
101348--101388
20
2.0
20
85
0
55
51
4
2
41
1.36
104507--104539
16
2.0
17
88
5
50
24
0
3
72
0.98
104613--104644
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!