Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002507.1 Kokia drynarioides strain JFW-HI SEQ_114667, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  160088

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14662--14708
16
3.0
16
79
14
53
76
0
21
2
0.89
23017--23103
42
2.1
42
89
8
133
54
0
8
37
1.30
30218--30263
19
2.3
20
79
20
53
58
2
15
23
1.48
35854--35890
15
2.5
15
90
0
56
51
8
32
8
1.61
35882--35928
21
2.2
20
82
10
58
68
0
29
2
1.02
61411--61453
17
2.5
17
82
17
54
16
9
18
55
1.67
62006--62058
23
2.5
21
75
9
54
77
3
13
5
1.09
71169--71208
18
2.3
18
86
4
55
52
10
17
20
1.72
85885--85929
17
2.7
16
83
10
54
24
13
8
53
1.68
85885--85937
17
3.1
17
83
0
52
24
15
9
50
1.73
86545--86578
3
11.3
3
100
0
68
67
0
0
32
0.91
93740--93780
21
2.0
20
85
9
55
29
0
4
65
1.13
103587--103633
15
3.1
15
78
9
51
59
0
2
38
1.09
106218--106261
23
1.9
23
95
0
79
36
11
25
27
1.90
106220--106269
23
2.2
23
85
7
66
40
12
20
28
1.87
107876--107917
20
2.1
20
90
0
66
23
21
23
30
1.99
111752--112108
197
1.8
197
93
0
615
28
14
15
42
1.85
121565--121626
16
3.7
17
79
8
65
64
8
0
27
1.21
121574--121638
18
3.7
16
78
15
58
66
6
1
26
1.24
121581--121629
17
2.8
18
80
17
59
67
8
0
24
1.18
122521--122580
24
2.5
24
83
0
75
25
13
11
50
1.75
124456--124501
24
1.9
24
100
0
92
21
8
10
58
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
124459--124513
24
2.3
24
90
6
85
23
12
12
50
1.74
126174--126491
80
4.0
80
83
3
354
30
21
21
26
1.98
130969--130998
14
2.2
14
94
5
53
30
23
10
36
1.87
139821--139869
16
2.9
16
84
6
62
77
2
18
2
0.96
144701--144753
3
17.7
3
96
0
97
32
1
0
66
1.03
151203--151243
15
2.9
14
86
10
57
0
14
9
75
1.04
151783--152047
40
6.8
40
73
9
217
27
16
23
32
1.96
151802--152073
78
3.5
77
82
4
287
27
15
23
33
1.95
151762--151984
117
1.9
117
85
3
306
26
17
23
32
1.97
159540--159577
17
2.2
18
86
9
53
81
0
5
13
0.85

Tables:   1

The End!