Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002514.1 Kokia drynarioides strain JFW-HI SEQ_114680, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53548

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1079--1303
112
2.0
112
97
0
425
51
16
7
25
1.69
1725--1792
16
4.2
16
69
10
57
48
0
1
50
1.10
2243--2324
28
2.9
27
77
12
76
59
0
4
35
1.19
2254--2314
28
2.1
30
84
6
81
62
0
4
32
1.17
13222--13406
82
2.3
80
84
10
243
56
1
11
30
1.44
13274--13387
29
4.1
29
69
15
89
53
1
10
34
1.46
14428--14452
2
12.5
2
100
0
50
52
48
0
0
1.00
15909--15942
18
1.9
17
88
5
50
76
5
2
14
1.09
21666--21876
49
4.3
49
80
4
201
39
18
22
19
1.93
22183--22680
94
5.4
94
79
12
452
30
17
28
23
1.97
22084--22405
95
3.4
95
70
11
300
31
16
27
25
1.96
22087--22892
189
4.3
189
79
7
818
30
17
27
24
1.97
22485--22660
87
2.0
87
97
0
334
30
18
29
21
1.97
22204--22870
370
1.8
370
86
0
983
30
16
27
24
1.97
22364--22870
94
5.5
94
76
9
500
30
17
28
24
1.97
24635--24711
32
2.4
32
85
6
102
29
11
1
57
1.43
24611--24694
32
3.0
26
72
23
62
29
13
1
55
1.45
29178--29233
24
2.5
21
80
13
58
44
26
14
14
1.83
29200--29260
22
2.8
22
82
0
68
40
22
14
21
1.90
33957--33996
22
1.9
20
90
10
62
2
22
5
70
1.19
37663--37719
27
2.1
27
90
6
89
28
19
22
29
1.98
39164--39238
21
3.6
21
79
0
78
32
24
14
29
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46495--46547
21
2.6
21
78
3
54
32
28
9
30
1.88
49503--49561
20
2.8
22
77
12
61
33
6
13
45
1.70
52378--52404
11
2.5
11
100
0
54
33
7
11
48
1.67

Tables:   1

The End!