Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002534.1 Kokia drynarioides strain JFW-HI SEQ_114713, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30483

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
523--1097
59
9.8
59
86
5
781
29
3
32
34
1.76
2915--3025
35
3.2
35
81
12
122
53
3
0
42
1.24
2927--3025
17
5.7
17
80
5
92
54
3
1
41
1.22
2927--3025
52
1.9
52
85
0
135
54
3
1
41
1.22
2934--2992
11
5.2
11
76
10
57
54
3
1
40
1.27
2933--2993
6
10.5
6
74
13
56
52
3
1
42
1.27
3077--3208
29
4.6
29
80
11
137
37
27
3
31
1.74
3063--3178
58
2.0
57
85
6
153
38
30
1
29
1.67
3077--3225
29
5.2
30
81
7
121
37
27
4
30
1.75
12820--13149
99
3.4
98
86
2
459
32
18
34
13
1.91
12810--13185
49
7.6
49
70
6
224
34
17
33
14
1.90
13095--13206
50
2.2
50
83
0
134
37
18
25
17
1.93
13606--13640
17
2.1
17
94
0
61
40
0
2
57
1.14
15532--15792
30
8.9
29
79
11
239
35
27
1
36
1.65
15532--15822
59
5.0
58
77
14
242
36
26
1
35
1.65
15532--15792
88
3.0
88
79
10
268
35
27
1
36
1.65
15751--15913
29
5.6
28
80
9
145
38
25
1
33
1.67
15803--15913
58
1.9
58
92
7
190
37
26
1
34
1.67
15798--15926
58
2.2
58
82
13
176
40
25
1
32
1.65
16849--17018
39
4.4
39
77
0
142
27
20
17
35
1.94
20659--20714
26
2.2
26
100
0
112
44
16
10
28
1.80
23746--23919
39
4.5
39
81
0
195
25
18
20
35
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23720--23919
78
2.6
78
79
0
202
25
18
20
36
1.94
26804--26872
32
2.1
32
81
7
77
42
5
2
49
1.41
26892--26917
11
2.4
11
100
0
52
23
7
0
69
1.14
29652--29708
17
3.4
17
85
0
78
43
0
3
52
1.18
30400--30429
3
9.7
3
92
7
51
66
0
0
33
0.92

Tables:   1

The End!