Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002552.1 Kokia drynarioides strain JFW-HI SEQ_114742, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  144937

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4781--4808
5
5.6
5
100
0
56
0
17
0
82
0.68
8730--8877
74
2.0
74
93
0
251
31
10
22
35
1.88
18395--18435
20
2.0
20
85
0
55
12
2
24
60
1.43
24855--24931
38
2.0
38
97
0
145
28
27
12
31
1.93
41050--41103
17
3.1
17
75
19
56
40
0
1
57
1.09
49552--49600
23
2.2
22
81
3
53
65
2
2
30
1.15
60032--60064
2
16.5
2
100
0
66
48
0
0
51
1.00
73144--73174
7
4.4
7
100
0
62
41
0
0
58
0.98
76667--76721
4
13.2
4
78
14
58
45
25
7
21
1.77
76659--76705
22
2.1
22
84
0
58
48
27
4
19
1.67
78690--78904
106
2.0
106
94
0
376
37
11
23
27
1.89
79958--79982
3
8.3
3
100
0
50
32
0
0
68
0.90
83952--84020
31
2.2
31
86
0
102
42
5
11
40
1.65
92361--92403
23
1.9
22
90
4
68
60
2
6
30
1.35
93370--93407
17
2.4
16
87
12
53
26
5
5
63
1.37
96541--96571
14
2.3
14
94
5
55
54
0
12
32
1.38
101338--101364
7
3.9
7
100
0
54
14
0
0
85
0.61
101868--101914
24
2.0
22
88
8
67
68
4
0
27
1.08
115092--115129
19
2.1
19
85
5
51
42
2
13
42
1.57
115932--116023
42
2.2
42
98
0
175
33
28
16
21
1.95
116879--116908
5
6.2
5
96
3
53
60
0
0
40
0.97
116876--116909
15
2.4
14
86
13
52
55
0
0
44
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
120099--120126
4
7.0
4
100
0
56
25
0
25
50
1.50
121433--121460
2
14.0
2
100
0
56
0
50
0
50
1.00
121460--121490
2
15.5
2
100
0
62
48
0
0
51
1.00
125238--125267
15
2.0
15
93
0
51
0
23
0
76
0.78
127090--127160
36
2.0
36
97
0
133
43
16
4
35
1.68

Tables:   1

The End!