Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01002591.1 Kokia drynarioides strain JFW-HI SEQ_114798, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 910

Length: 1517
ACGTcount: A:0.33, C:0.18, G:0.17, T:0.32


Found at i:1185 original size:21 final size:21

Alignment explanation


    Indices: 1161--1200  Score: 71
    Period size: 21  Copynumber: 1.9  Consensus size: 21

       1151 TTTTCTAAGC

                *                
       1161 TTATGTTTATGAGCTTATTAG
          1 TTATATTTATGAGCTTATTAG

                               
       1182 TTATATTTATGAGCTTATT
          1 TTATATTTATGAGCTTATT

       1201 TTGCAGTCAT


Statistics
Matches: 18,  Mismatches: 1, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
  21   18  1.00

ACGTcount: A:0.25, C:0.05, G:0.15, T:0.55


Consensus pattern (21 bp):   
TTATATTTATGAGCTTATTAG
Done.