Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002600.1 Kokia drynarioides strain JFW-HI SEQ_114811, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57913

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2485--2522
19
2.0
19
94
0
67
50
21
13
15
1.78
2878--2916
6
6.3
6
82
5
51
15
0
15
69
1.20
10452--10646
97
2.0
98
80
6
218
39
13
16
30
1.87
10861--10923
29
2.2
29
91
2
101
30
11
26
31
1.91
10908--11321
58
7.1
58
80
8
342
39
3
27
30
1.72
10998--11340
29
11.8
29
67
16
149
39
2
25
32
1.70
11240--11401
30
5.4
30
76
8
134
35
3
23
37
1.73
10962--11395
58
7.4
57
75
11
290
38
2
25
32
1.71
12436--12538
3
33.3
3
80
13
111
33
2
1
61
1.22
13310--13355
6
7.8
6
80
4
58
56
2
0
41
1.11
13698--13892
101
1.9
101
85
0
264
30
17
16
34
1.93
14026--14211
49
3.8
47
76
13
146
15
24
20
39
1.92
13997--14220
98
2.3
96
79
6
243
17
25
18
38
1.92
25594--25697
51
2.1
49
83
7
129
36
10
21
31
1.87
26091--26187
27
3.4
27
72
24
76
39
4
21
35
1.73
26002--26192
28
6.7
27
68
16
100
36
4
26
32
1.77
26002--26423
59
7.3
59
78
8
361
38
3
25
32
1.72
26002--26486
117
4.2
116
75
11
379
38
3
25
32
1.71
26406--26521
30
3.9
30
74
7
103
38
1
21
37
1.64
26078--26486
58
7.0
59
77
9
219
40
2
24
32
1.70
26084--26502
59
7.2
57
73
11
180
39
2
24
32
1.70
26084--26516
29
14.8
31
66
21
116
39
2
24
33
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27480--27539
3
19.3
3
84
6
75
33
1
1
63
1.14
28469--28528
28
2.1
28
87
6
86
28
6
28
36
1.82
28580--28741
30
5.5
28
76
13
150
33
3
25
37
1.72
28568--28801
59
4.0
60
81
9
266
33
4
25
36
1.76
29890--29937
3
16.0
3
100
0
96
33
0
0
66
0.92
30600--30693
6
16.0
6
70
16
72
51
2
2
44
1.25
30636--30687
19
2.8
19
91
5
81
57
0
1
40
1.10
30602--30687
17
4.9
17
79
10
93
52
2
2
43
1.26
31507--31571
20
3.6
18
82
10
78
58
1
4
35
1.28
34095--34125
16
1.9
16
93
0
53
19
25
25
29
1.99
34174--34231
29
2.0
29
96
0
107
29
31
17
22
1.96
34271--34383
54
2.1
54
96
0
208
25
19
22
32
1.97
34380--34455
22
3.5
22
73
7
73
38
21
13
27
1.90
34528--34645
14
8.2
14
73
9
103
33
28
19
18
1.96
34532--34648
29
4.1
29
86
5
132
34
28
19
17
1.95
36160--36249
45
2.0
46
81
14
107
33
5
0
61
1.19
37503--37593
47
2.0
47
82
10
116
58
2
6
32
1.36
38279--38315
18
2.0
19
89
5
58
45
0
21
32
1.52
41032--41076
19
2.4
19
81
7
56
37
0
4
57
1.19
43089--43144
21
2.7
21
86
2
69
48
8
10
32
1.69
43103--43144
20
2.0
21
90
4
68
50
7
11
30
1.66
52076--52152
29
2.5
31
85
6
95
27
12
10
49
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53628--53694
18
3.6
18
74
20
57
46
1
4
47
1.31
53634--53696
19
3.3
19
84
2
81
42
1
3
52
1.27
56554--56618
29
2.2
30
83
2
78
41
1
4
52
1.31

Tables:   1

The End!