Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002604.1 Kokia drynarioides strain JFW-HI SEQ_114817, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  130487

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2468--2516
18
2.8
17
76
14
55
61
8
2
28
1.36
8756--8787
2
16.5
2
93
6
57
50
0
0
50
1.00
16766--16831
25
2.5
27
80
7
64
15
12
4
68
1.36
19790--19875
24
3.4
25
69
21
81
45
4
1
48
1.30
19792--19872
28
3.1
28
60
23
66
45
4
1
48
1.32
19770--19879
51
2.2
51
96
3
206
46
6
1
45
1.39
21905--21941
17
2.3
16
90
9
58
51
2
0
45
1.15
22366--22410
18
2.5
19
79
17
51
28
2
4
64
1.25
24103--24137
11
3.0
12
83
8
54
31
5
0
62
1.18
24410--24465
28
2.0
29
85
3
78
25
7
5
62
1.42
33242--33290
19
2.6
19
83
6
55
36
16
4
42
1.67
39500--39571
4
18.0
4
97
0
117
45
25
4
25
1.71
40312--40368
29
2.0
29
89
0
87
61
21
1
15
1.43
40385--40448
30
2.2
29
86
8
85
54
26
10
7
1.62
40386--40447
28
2.2
28
82
8
72
56
24
11
8
1.61
41043--41116
22
3.4
22
94
0
130
35
27
25
12
1.91
41327--41355
14
2.0
15
93
6
51
34
24
0
41
1.55
44402--44443
21
2.0
21
90
9
68
57
4
0
38
1.20
48659--48695
3
12.3
3
100
0
74
32
0
0
67
0.91
49606--49648
23
2.0
20
86
13
59
25
4
20
48
1.69
51375--51438
24
2.7
24
82
2
85
57
7
3
31
1.43
68237--68342
54
2.0
54
90
0
167
33
14
18
33
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71558--71624
33
2.0
33
85
0
89
29
5
13
50
1.65
79317--79349
6
5.5
6
100
0
66
33
18
0
48
1.48
86206--86256
22
2.3
22
100
0
102
41
3
3
50
1.39
86206--86268
22
2.9
22
90
2
65
41
3
3
52
1.33
93401--93472
29
2.5
29
74
0
72
23
27
22
26
1.99
95523--95698
50
3.5
50
88
2
201
21
25
18
35
1.95
95521--95731
26
8.1
26
76
10
207
21
23
18
36
1.95
95666--95730
32
2.0
32
93
0
112
26
20
13
40
1.89
95521--95731
50
4.0
52
84
6
189
21
23
18
36
1.95
95736--95772
2
18.5
2
94
0
65
48
2
0
48
1.15
95743--95782
18
2.2
18
86
0
53
45
7
5
42
1.54
96521--96622
47
2.1
47
98
1
195
28
19
21
30
1.98
113342--113464
43
2.9
43
83
8
153
25
25
20
29
1.99
115391--115428
20
2.1
19
85
14
53
36
0
5
57
1.21
117983--118021
16
2.3
17
91
8
62
43
5
5
46
1.48
118727--118770
6
7.3
6
100
0
88
18
50
15
15
1.79
120879--120999
31
4.0
30
72
14
97
49
9
17
23
1.75
124161--124216
28
2.0
28
93
3
96
39
12
17
30
1.87
126237--126312
25
3.0
24
73
16
73
30
15
2
51
1.57
127958--128024
31
2.2
30
84
5
82
43
14
8
32
1.77

Tables:   1

The End!