Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01002643.1 Kokia drynarioides strain JFW-HI SEQ_114875, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 621

Length: 1035
ACGTcount: A:0.45, C:0.15, G:0.09, T:0.31


Found at i:677 original size:6 final size:6

Alignment explanation


    Indices: 666--690  Score: 50
    Period size: 6  Copynumber: 4.2  Consensus size: 6

        656 AACATATACC

                                         
        666 AAACCA AAACCA AAACCA AAACCA A
          1 AAACCA AAACCA AAACCA AAACCA A

        691 CAATTCTCCA


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   19  1.00

ACGTcount: A:0.68, C:0.32, G:0.00, T:0.00


Consensus pattern (6 bp):   
AAACCA

Done.