Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002660.1 Kokia drynarioides strain JFW-HI SEQ_114909, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31126

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
341--1015
59
11.3
60
72
8
326
27
16
15
40
1.89
432--1057
118
5.3
118
73
13
399
29
15
14
40
1.87
431--997
236
2.4
242
78
8
640
28
15
14
41
1.87
609--1062
59
7.7
57
72
12
226
29
16
14
39
1.88
1388--1513
60
2.1
59
85
5
166
33
15
13
38
1.86
2230--2373
59
2.4
60
82
8
168
40
12
12
34
1.81
2229--2393
59
2.7
58
79
13
158
41
12
13
32
1.83
5402--5465
2
32.0
2
100
0
128
50
0
0
50
1.00
5507--5544
19
2.0
20
84
5
51
34
2
2
60
1.24
7443--7485
4
10.2
4
82
9
50
76
0
18
4
0.95
9164--9194
15
2.1
15
100
0
62
25
0
41
32
1.56
10385--10421
14
2.5
15
91
4
58
32
0
16
51
1.45
10431--10471
21
2.0
21
85
0
55
29
0
29
41
1.56
10484--10521
14
2.7
14
80
15
51
23
0
21
55
1.44
10504--10549
21
2.2
21
88
0
65
21
0
26
52
1.47
10580--10657
7
10.9
7
75
9
68
28
1
28
42
1.64
10568--10657
21
4.2
21
76
2
63
28
2
25
43
1.67
11010--11036
6
4.5
6
100
0
54
0
51
0
48
1.00
11506--11601
43
2.3
43
85
5
124
50
9
7
33
1.62
12479--12528
16
3.2
16
73
21
61
32
0
8
60
1.26
14410--14452
12
3.6
12
77
0
50
30
4
4
60
1.37
21456--21490
18
2.0
18
94
5
63
45
0
8
45
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21458--21496
18
2.2
17
86
4
51
56
0
7
35
1.28
24032--24111
30
2.7
30
80
7
108
36
15
13
35
1.86
28137--28241
43
2.5
41
73
11
97
35
22
13
28
1.92

Tables:   1

The End!