Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002671.1 Kokia drynarioides strain JFW-HI SEQ_114925, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  134759

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
118--158
7
5.7
7
94
2
64
0
39
0
60
0.96
100--158
21
2.8
22
85
7
70
1
42
0
55
1.09
150--192
4
10.8
4
85
9
61
0
23
0
76
0.78
147--203
11
4.9
11
81
12
60
1
24
0
73
0.92
136--203
11
6.3
11
75
13
52
1
27
0
70
0.96
2419--2602
90
2.0
91
92
1
307
21
16
10
52
1.73
14053--14228
96
1.8
96
83
0
235
39
10
8
40
1.71
15155--15183
7
4.3
7
95
4
51
27
41
0
31
1.56
31528--31592
34
1.9
34
96
0
121
40
12
23
24
1.89
32458--32526
36
1.9
37
82
5
88
53
4
0
42
1.20
47698--48083
196
2.0
194
88
2
576
30
17
12
39
1.87
51271--51352
31
2.6
31
81
9
87
35
17
12
35
1.87
53329--53389
31
2.0
31
100
0
122
32
18
19
29
1.95
54808--54870
27
2.3
28
81
10
76
52
3
7
36
1.47
54994--55026
16
2.1
16
88
5
50
81
9
0
9
0.87
55271--55317
18
2.8
17
78
9
60
61
0
2
36
1.08
58204--58239
18
2.0
18
88
0
54
41
2
19
36
1.66
58933--58971
21
1.9
19
85
10
51
30
7
7
53
1.57
69167--69317
58
2.6
59
81
6
182
52
3
1
43
1.26
74909--74955
23
2.0
23
100
0
94
34
4
8
53
1.51
79059--79087
2
14.5
2
100
0
58
51
0
48
0
1.00
82904--82933
3
10.0
3
100
0
60
66
0
0
33
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84099--84123
12
2.1
12
100
0
50
68
0
0
32
0.90
96784--96810
2
13.5
2
100
0
54
51
0
0
48
1.00
113739--113780
21
2.0
21
85
0
57
30
2
2
64
1.19
113788--113825
18
2.1
18
85
9
51
44
0
5
50
1.24
115640--115673
16
2.1
16
100
0
68
23
5
26
44
1.76
115808--115899
48
1.9
48
95
0
166
47
13
14
25
1.79
115873--116001
64
2.0
64
95
0
231
46
17
13
22
1.83
126322--126356
17
2.0
18
88
5
54
42
8
0
48
1.33

Tables:   1

The End!