Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002685.1 Kokia drynarioides strain JFW-HI SEQ_114952, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85471

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
893--932
18
2.2
19
86
4
55
52
0
25
22
1.47
3496--3553
29
2.1
29
87
6
84
63
10
5
20
1.44
7691--7758
33
2.1
33
94
0
118
36
32
11
19
1.88
11419--11483
18
3.4
18
71
21
53
0
29
0
70
0.87
11423--11482
20
3.1
19
75
15
59
0
28
0
71
0.86
11437--11497
19
3.4
17
78
13
52
1
24
0
73
0.92
27323--27387
11
5.9
11
74
13
53
35
0
3
61
1.12
33280--33402
62
2.0
62
93
6
214
41
12
17
29
1.85
34565--34606
19
2.2
19
87
8
59
64
0
0
35
0.94
37208--37240
8
4.0
8
96
4
57
36
0
0
63
0.95
41719--41800
32
2.5
33
78
9
80
13
8
8
69
1.36
43961--44017
10
6.1
10
73
22
52
38
0
1
59
1.08
43961--44014
19
3.0
18
76
7
65
38
0
1
59
1.08
43961--44014
9
5.9
9
76
10
56
38
0
1
59
1.08
52954--53000
24
1.9
25
83
12
62
4
27
4
63
1.31
77627--78018
29
13.4
29
77
8
355
30
2
31
35
1.72
77627--78023
59
6.8
58
83
6
489
30
2
31
35
1.72
79004--79038
3
11.3
3
87
6
52
37
0
0
62
0.95
79810--79929
6
20.7
6
66
16
65
50
2
2
44
1.28
79822--79886
27
2.4
28
82
10
82
50
4
0
44
1.22
79837--79870
11
3.2
11
91
4
52
50
5
0
44
1.26
79847--79943
17
6.1
17
71
17
66
55
2
3
39
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79862--79924
11
5.8
11
74
10
58
58
0
3
38
1.14
80037--80107
28
3.0
22
65
21
52
36
4
7
52
1.48

Tables:   1

The End!