Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002711.1 Kokia drynarioides strain JFW-HI SEQ_115001, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78942

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--65
3
17.7
3
84
3
72
61
3
1
33
1.25
1210--1621
29
14.1
29
73
12
301
32
32
5
29
1.79
1210--1621
59
7.1
58
86
7
534
32
32
5
29
1.79
10624--10653
15
1.9
16
93
6
53
13
6
3
76
1.11
11331--11405
38
2.0
37
94
2
132
50
32
10
6
1.63
11346--11407
20
3.2
20
64
25
51
48
33
12
4
1.63
18482--18522
16
2.5
17
81
18
52
36
4
0
58
1.20
23647--23721
6
12.5
6
100
0
150
33
0
16
50
1.45
26661--26695
16
2.1
18
89
10
56
57
2
0
40
1.14
33368--33402
2
17.5
2
100
0
70
0
48
0
51
1.00
33816--33843
2
14.0
2
100
0
56
50
0
0
50
1.00
35459--35500
23
1.9
23
85
9
61
50
2
2
45
1.27
35502--35527
13
2.0
13
100
0
52
69
0
0
30
0.89
41914--41956
23
1.9
23
85
4
61
25
6
6
60
1.48
42452--42496
16
2.9
16
81
15
51
53
4
0
42
1.21
42459--42499
16
2.4
17
88
8
57
56
2
0
41
1.13
42459--42496
11
3.3
12
89
7
53
55
2
0
42
1.14
56768--56803
2
18.0
2
94
0
63
47
0
50
2
1.15
64182--64216
3
12.0
3
87
6
54
65
0
2
31
1.07
70620--70665
20
2.3
20
92
0
74
71
10
10
6
1.30
74822--74880
10
5.7
10
76
13
57
1
0
13
84
0.69
74812--74880
6
11.7
6
78
18
74
1
0
15
82
0.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74819--74875
21
2.7
21
92
7
98
1
0
14
84
0.71

Tables:   1

The End!