Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002748.1 Kokia drynarioides strain JFW-HI SEQ_115062, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100926

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1892--1948
28
2.0
28
89
0
87
33
15
29
21
1.94
6733--6808
37
2.1
37
100
0
152
30
13
9
47
1.73
15401--15534
64
2.1
65
91
1
216
53
14
2
29
1.55
18509--18538
12
2.5
12
88
0
51
6
43
16
33
1.74
23456--23507
26
2.0
26
84
3
68
34
17
5
42
1.73
23912--23968
22
2.6
22
88
0
87
33
15
17
33
1.92
24560--25654
551
2.0
546
91
1
1769
32
15
14
36
1.88
27112--27140
6
4.8
6
100
0
58
34
31
0
34
1.58
43177--43215
17
2.3
17
86
0
51
17
12
23
46
1.83
45209--45301
44
2.1
44
100
0
186
37
9
6
46
1.63
45426--45450
5
5.0
5
100
0
50
40
20
0
40
1.52
53632--53678
24
2.0
24
95
0
85
38
4
10
46
1.58
53633--53690
24
2.5
24
83
8
66
39
5
8
46
1.57
53918--53968
26
1.9
27
92
4
86
19
9
7
62
1.50
60512--60551
21
1.9
21
85
10
55
7
17
0
75
1.03
61595--61651
30
1.9
30
85
0
78
1
26
1
70
1.07
76693--76751
29
2.0
29
86
0
82
15
0
23
61
1.34
78286--78331
20
2.2
21
88
3
67
15
17
26
41
1.88
78287--78325
14
2.9
14
84
3
53
15
20
23
41
1.90
82332--82392
24
2.5
25
84
7
81
57
6
9
26
1.55
99692--99771
40
2.0
40
100
0
160
25
20
25
30
1.99

Tables:   1

The End!