Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002755.1 Kokia drynarioides strain JFW-HI SEQ_115071, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70037

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6865--6913
24
2.0
24
100
0
98
40
28
8
22
1.82
15096--15141
21
2.1
22
84
11
60
28
0
4
67
1.10
16654--16722
6
11.5
6
96
0
120
47
0
34
17
1.48
16831--16879
25
2.0
25
83
0
62
44
8
2
44
1.45
18466--18549
12
6.7
12
80
10
71
38
4
1
55
1.28
18510--18563
21
2.4
22
82
17
67
40
1
1
55
1.21
19323--19362
11
3.6
11
82
0
53
52
0
0
47
1.00
19323--19423
6
18.0
6
67
13
54
52
3
3
39
1.39
19325--19425
17
6.1
17
74
3
98
53
3
3
38
1.38
19884--20029
39
3.8
38
81
10
179
24
19
30
24
1.98
19866--20041
78
2.3
78
88
1
264
24
17
32
26
1.96
20335--20706
49
7.6
48
73
13
285
19
26
16
37
1.93
20319--20743
98
4.3
98
88
0
573
18
25
18
38
1.93
20306--20743
196
2.2
196
86
1
635
17
25
18
38
1.92
20317--20743
49
8.7
48
69
15
239
18
25
18
38
1.93
21115--21150
18
2.0
18
88
0
54
55
11
13
19
1.68
21332--21383
22
2.4
22
93
0
86
26
26
7
38
1.83
26354--26413
28
2.1
28
87
0
84
28
8
28
35
1.86
26498--26590
29
3.2
29
71
14
100
34
7
23
34
1.83
26395--26621
59
3.9
58
85
5
280
36
6
25
32
1.81
26571--26741
28
6.0
28
75
13
152
33
2
27
36
1.70
26395--26733
59
5.9
57
80
8
271
35
5
25
33
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26511--26805
29
10.1
29
72
13
180
36
2
26
34
1.71
26571--26766
57
3.4
57
83
6
193
35
2
26
35
1.68
27981--28038
21
2.5
22
83
13
73
39
1
1
56
1.19
28797--28836
11
3.6
11
82
0
53
52
0
0
47
1.00
28792--28835
22
2.0
23
90
4
72
54
0
2
43
1.12
28790--28900
6
19.5
6
71
13
74
50
4
3
41
1.40
28799--28897
17
5.9
17
76
3
103
53
5
3
38
1.38
28811--28899
34
2.7
33
83
1
115
53
5
3
37
1.41
41182--41329
74
2.0
74
100
0
296
29
17
18
33
1.94
42671--42719
15
3.3
15
77
5
55
48
0
6
44
1.27
44103--44130
5
5.6
5
100
0
56
57
21
0
21
1.41
47295--47334
19
2.0
20
85
4
55
52
2
2
42
1.28
51497--51670
86
2.0
86
100
0
348
37
10
10
41
1.74
58836--58969
59
2.2
60
84
6
164
14
28
8
48
1.73

Tables:   1

The End!