Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002771.1 Kokia drynarioides strain JFW-HI SEQ_115096, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12388

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59--101
11
4.2
10
83
13
52
18
2
4
74
1.10
52--95
17
2.4
19
85
14
58
20
0
9
70
1.14
4385--4514
58
2.2
58
93
2
217
32
9
30
28
1.88
4511--4574
30
2.1
30
88
5
94
43
3
18
34
1.66
4530--4779
59
4.3
59
78
9
251
42
1
23
33
1.64
4527--4787
29
8.9
28
70
10
123
41
1
23
32
1.64
4739--4799
28
2.2
28
85
5
79
44
0
24
31
1.54
5491--5542
3
17.0
3
84
4
68
34
1
1
61
1.18
8671--8964
96
3.0
96
75
5
295
35
18
20
26
1.95
8970--9161
48
4.1
48
83
5
232
38
24
13
23
1.91
9126--9193
33
2.1
32
86
2
91
35
22
22
20
1.96
9195--9351
48
3.3
47
72
11
122
38
22
12
27
1.89
9030--9286
128
2.0
129
82
2
311
37
23
15
23
1.93
9372--9553
101
1.8
99
83
4
224
37
18
14
29
1.90
9588--9617
14
2.1
14
100
0
60
20
13
13
53
1.72
9935--9959
7
3.6
7
100
0
50
60
40
0
0
0.97
11549--11590
18
2.3
18
84
12
50
26
4
4
64
1.33

Tables:   1

The End!