Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01002791.1 Kokia drynarioides strain JFW-HI SEQ_115131, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 898

Length: 1497
ACGTcount: A:0.36, C:0.26, G:0.13, T:0.24


Found at i:54 original size:18 final size:16

Alignment explanation


    Indices: 11--42  Score: 55
    Period size: 16  Copynumber: 2.0  Consensus size: 16

          1 GAAATAAATA

                *           
         11 AATACCCAAAATACCT
          1 AATAACCAAAATACCT

                            
         27 AATAACCAAAATACCT
          1 AATAACCAAAATACCT

         43 TCCATAACCA


Statistics
Matches: 15,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  16   15  1.00

ACGTcount: A:0.53, C:0.28, G:0.00, T:0.19


Consensus pattern (16 bp):   
AATAACCAAAATACCT
Done.