Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002800.1 Kokia drynarioides strain JFW-HI SEQ_115143, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88569

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3886--3917
16
2.0
16
100
0
64
43
6
0
50
1.27
17489--17549
30
2.0
30
96
0
113
36
24
6
32
1.81
24695--24887
94
2.0
95
92
1
325
30
13
11
44
1.80
33921--34039
61
2.0
61
94
0
211
36
10
15
38
1.81
34299--34464
85
1.9
86
84
6
221
25
15
17
41
1.89
36021--36054
17
2.0
17
94
0
59
17
26
17
38
1.92
39026--39050
7
3.6
7
100
0
50
12
16
28
44
1.83
39666--39698
17
2.0
17
88
5
50
48
0
0
51
1.00
40911--40940
15
2.0
15
93
0
51
70
10
13
6
1.34
47737--47784
20
2.5
19
80
10
53
68
0
10
20
1.18
49571--49824
99
2.6
94
76
11
214
25
25
14
35
1.94
49664--50088
189
2.2
190
83
1
539
25
27
15
31
1.96
50251--51185
49
19.1
49
79
3
855
20
25
16
37
1.93
51622--51837
112
1.9
112
88
0
324
42
11
17
29
1.84
52149--52214
7
9.7
7
83
9
84
0
16
0
83
0.65
52148--52213
22
3.3
20
84
12
91
0
18
0
81
0.68
52149--52216
12
5.2
12
83
13
73
0
16
0
83
0.64
54916--54969
15
3.7
14
77
5
54
3
9
11
75
1.15
58373--58455
40
2.1
40
100
0
166
30
15
12
42
1.83
59432--59508
11
6.8
11
69
26
54
55
0
1
42
1.07
68027--68355
23
14.3
23
88
1
401
34
4
14
46
1.64
71589--71779
106
1.8
106
84
8
264
28
20
26
23
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75784--75820
19
1.9
19
94
0
65
35
24
10
29
1.89
83491--83525
6
5.8
6
89
0
52
11
0
54
34
1.37
83479--83521
18
2.3
19
84
4
61
11
2
51
34
1.51
84061--84158
30
2.9
34
73
20
89
52
5
0
42
1.23
84430--84478
21
2.4
19
87
9
71
20
10
0
69
1.17
84435--84478
21
2.1
21
100
0
88
18
9
0
72
1.10
87045--87158
42
2.6
47
79
9
125
42
6
0
51
1.26

Tables:   1

The End!