Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002802.1 Kokia drynarioides strain JFW-HI SEQ_115146, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49003

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65--141
4
19.2
4
76
10
68
1
33
0
64
1.01
64--137
17
4.6
16
75
11
71
1
35
0
63
1.03
5759--6003
119
2.0
120
95
0
438
42
9
4
43
1.55
5763--5947
61
3.1
60
63
21
143
44
10
3
40
1.57
5774--5958
56
3.1
61
63
16
150
43
11
4
40
1.60
6366--6424
24
2.4
26
73
23
65
54
1
5
38
1.33
7118--7176
17
3.5
17
73
13
59
45
0
1
52
1.10
7118--7185
33
2.1
33
91
0
109
44
1
2
51
1.25
7229--7259
2
15.5
2
93
0
53
45
0
3
51
1.17
16542--16576
2
18.0
2
94
5
63
51
0
0
48
1.00
20868--20917
18
2.8
18
96
0
91
48
6
20
26
1.72
27360--27399
6
6.7
6
100
0
80
35
35
30
0
1.58
31539--31573
7
5.0
7
96
0
61
31
0
0
68
0.90
31530--31573
21
2.1
21
86
0
61
36
0
0
63
0.95
35498--35541
13
3.4
13
75
12
54
31
9
11
47
1.71
35491--35541
26
2.0
26
92
0
84
29
11
11
47
1.76
46056--46119
25
2.4
28
82
10
80
51
0
0
48
1.00
46081--46124
20
2.3
19
84
11
54
45
0
0
54
0.99
46591--46621
13
2.4
13
100
0
62
29
0
22
48
1.51
47537--47565
10
2.9
10
100
0
58
10
0
37
51
1.36

Tables:   1

The End!