Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002812.1 Kokia drynarioides strain JFW-HI SEQ_115166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63959

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8150--8195
22
2.1
22
100
0
92
47
21
13
17
1.81
12143--12226
16
5.1
16
72
13
80
29
3
5
60
1.37
15670--15863
97
2.0
97
85
4
266
40
13
16
29
1.87
16080--16141
27
2.2
28
91
5
99
22
4
35
37
1.76
16117--16159
21
2.1
21
86
4
61
34
0
27
37
1.57
16235--16340
29
3.6
29
74
13
92
41
1
23
33
1.65
16271--16364
29
3.2
29
72
11
75
41
3
21
34
1.69
16166--16364
59
3.4
58
77
10
201
38
3
24
33
1.73
17097--17140
19
2.4
19
88
3
63
43
2
0
54
1.12
17824--17886
17
3.7
17
82
0
81
52
0
3
44
1.17
17820--17911
23
4.1
22
73
13
80
54
2
2
41
1.25
17823--17906
34
2.5
33
78
7
96
53
2
2
41
1.27
18873--19192
49
6.6
49
70
11
208
17
26
19
36
1.94
18860--19146
97
2.9
96
85
5
346
18
26
19
35
1.95
18915--19248
147
2.3
147
83
5
428
17
25
20
37
1.93
18920--19248
49
6.7
50
72
11
229
16
25
20
37
1.93
19682--19716
18
1.9
18
94
0
61
57
11
11
20
1.64
23962--24005
18
2.4
18
80
3
52
4
36
4
54
1.41
32878--33037
37
4.3
37
84
3
214
15
22
31
30
1.95
32960--33022
21
3.2
21
63
21
55
12
20
33
33
1.90
32866--33050
74
2.5
74
84
2
228
14
21
31
31
1.93
36772--36850
30
2.7
30
78
2
88
40
22
10
26
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36772--36847
15
5.1
15
68
9
66
40
22
10
26
1.86
36859--36902
15
2.9
15
75
0
52
45
18
6
29
1.75
37505--37564
21
2.9
21
74
0
57
36
21
20
21
1.95
38959--38995
9
4.0
9
89
3
56
67
8
2
21
1.29
44952--45000
24
2.0
24
84
0
62
34
0
42
22
1.54
44989--45041
15
3.5
15
72
10
54
18
0
60
20
1.36
47156--47617
160
2.9
158
82
4
522
35
17
14
31
1.90
47691--47892
82
2.5
82
95
2
363
27
6
17
48
1.72
49658--49701
18
2.4
18
81
7
54
31
0
2
65
1.05
49971--50030
27
2.2
27
80
13
70
63
1
0
35
1.05
49970--50029
28
2.1
28
82
11
70
61
1
0
36
1.06
56774--56813
16
2.4
17
87
8
64
72
12
0
15
1.12
59977--60047
27
2.6
26
78
8
79
12
1
35
50
1.49
60663--60718
14
3.9
14
71
19
53
50
1
1
46
1.22
60677--60754
37
2.1
38
92
2
131
48
2
1
47
1.23
60678--60744
20
3.5
20
63
19
52
49
2
1
46
1.26

Tables:   1

The End!