Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002825.1 Kokia drynarioides strain JFW-HI SEQ_115182, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76891

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1676--1714
17
2.3
17
90
0
60
15
12
25
46
1.81
8376--8405
2
15.0
2
92
0
51
53
0
0
46
1.00
11106--11141
18
1.9
19
88
5
56
61
8
0
30
1.26
45699--45724
6
4.3
6
100
0
52
15
69
15
0
1.20
54209--54480
37
7.4
37
73
6
221
20
36
4
38
1.73
54208--54480
74
3.7
73
76
7
257
20
36
4
38
1.73
55427--55779
37
9.5
37
76
6
268
17
35
5
41
1.72
55428--55779
111
3.2
110
78
7
327
17
35
5
41
1.72
56652--56871
37
6.0
37
75
1
172
17
39
4
38
1.70
59495--59520
3
8.7
3
100
0
52
34
30
0
34
1.58
59533--59564
3
10.3
3
93
6
55
31
3
0
65
1.08
63806--63878
29
2.5
28
80
13
76
61
1
4
32
1.23
63844--63918
11
7.2
11
75
11
50
65
0
4
30
1.11
63803--63878
19
3.8
19
73
11
55
61
1
3
32
1.22
63866--63910
21
2.3
19
85
11
63
71
0
4
24
1.05
65147--65189
18
2.3
19
84
11
54
53
4
0
41
1.21
70782--70816
2
17.0
2
88
5
52
45
0
5
48
1.26

Tables:   1

The End!