Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002837.1 Kokia drynarioides strain JFW-HI SEQ_115210, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54670

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
263--316
17
3.2
16
74
7
54
50
1
1
46
1.23
729--774
23
2.0
23
100
0
92
39
8
17
34
1.80
5600--5654
2
27.0
2
92
3
92
47
1
0
50
1.11
7970--7997
3
9.3
3
100
0
56
0
32
0
67
0.91
9032--9109
40
2.0
39
92
2
129
32
25
6
35
1.81
10732--10761
2
15.0
2
100
0
60
50
0
0
50
1.00
13224--13362
69
2.0
69
98
0
269
32
20
6
40
1.78
13782--13903
17
7.1
17
88
3
181
44
1
0
54
1.10
13782--13907
35
3.7
34
89
4
166
45
1
0
53
1.10
13815--13877
11
5.5
11
79
9
65
42
0
0
57
0.99
13782--13903
52
2.3
52
90
2
183
44
1
0
54
1.10
15755--16065
30
10.5
30
81
5
312
35
30
3
30
1.75
15751--16015
59
4.4
58
86
7
336
35
31
2
30
1.72
15755--16066
59
5.3
59
83
6
319
34
30
3
30
1.75
26354--26403
24
2.1
24
84
0
64
14
42
2
42
1.56
30215--30240
9
2.9
9
100
0
52
69
0
23
7
1.14
33107--33135
15
1.9
15
100
0
58
41
37
0
20
1.53
37794--37845
22
2.3
23
86
3
70
50
1
1
46
1.23
40925--40981
22
2.6
22
81
10
55
45
7
14
33
1.71
42624--42675
15
3.8
13
79
20
54
51
0
0
48
1.00
42632--42693
29
2.2
28
82
2
70
53
0
4
41
1.22

Tables:   1

The End!