Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002854.1 Kokia drynarioides strain JFW-HI SEQ_115248, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59149

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
896--941
20
2.3
20
84
0
65
41
13
4
41
1.63
983--1212
60
3.9
57
77
12
175
36
17
17
28
1.93
3002--3031
9
3.4
9
95
4
53
56
0
0
43
0.99
2999--3045
16
2.8
17
78
15
62
59
2
0
38
1.09
2999--3039
8
5.1
8
78
21
50
60
0
0
39
0.96
3225--3295
24
3.0
23
74
15
74
29
1
0
69
0.98
3225--3274
21
2.5
20
84
12
66
30
2
0
68
1.01
15301--15645
52
6.6
52
87
2
460
27
12
22
37
1.91
15594--15714
62
1.9
63
85
5
165
32
11
20
35
1.89
20366--20398
16
2.1
16
100
0
66
42
6
15
36
1.71
26589--26613
3
8.3
3
100
0
50
0
32
0
68
0.90
32541--32585
20
2.1
22
88
8
67
64
6
0
28
1.19
32722--32772
13
4.2
12
82
9
59
29
3
1
64
1.22
32714--32772
26
2.6
21
76
21
64
30
3
1
64
1.20
32724--32772
26
2.0
26
88
8
75
30
4
2
63
1.24
34342--34545
42
4.8
42
79
4
194
23
18
19
38
1.93
34336--34504
84
2.0
84
85
5
225
24
17
18
38
1.93
34468--34590
43
2.9
43
74
7
115
21
18
19
39
1.92
37166--37217
21
2.5
21
81
3
61
65
5
0
28
1.16
51777--51819
19
2.3
19
100
0
86
9
46
25
18
1.79

Tables:   1

The End!