Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002884.1 Kokia drynarioides strain JFW-HI SEQ_115296, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50202

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3133--3220
29
2.9
30
72
5
88
51
3
1
44
1.25
3550--3594
23
2.0
23
91
4
74
33
4
0
62
1.15
5674--5708
3
11.7
3
100
0
70
65
0
0
34
0.93
10026--10067
16
2.7
15
82
7
57
45
2
0
52
1.13
12063--12111
3
17.0
3
80
19
52
34
0
0
65
0.93
12063--12111
8
5.7
9
78
21
52
34
0
0
65
0.93
14400--14475
24
3.2
24
88
0
89
30
27
17
25
1.97
14687--14731
8
5.6
8
94
0
81
62
8
0
28
1.25
14687--14732
24
1.9
24
100
0
92
60
8
0
30
1.26
21872--21914
17
2.6
16
78
10
50
39
0
2
58
1.11
21920--21953
16
2.0
18
88
11
54
41
0
0
58
0.98
22812--23567
206
3.8
205
89
4
1043
22
23
21
32
1.98
27828--27877
22
2.3
22
82
6
57
30
14
10
46
1.77
28420--28458
17
2.3
17
90
0
60
46
25
12
15
1.81
35929--35985
9
6.0
9
77
16
53
54
3
0
42
1.17
35938--36001
30
2.1
31
82
8
78
51
4
3
40
1.38
36264--36300
9
4.1
9
96
0
56
48
0
0
51
1.00
44952--44986
17
1.9
17
88
11
52
65
5
2
25
1.28
47921--47945
12
2.1
12
100
0
50
44
0
8
48
1.32

Tables:   1

The End!