Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002892.1 Kokia drynarioides strain JFW-HI SEQ_115306, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50995

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2077--2111
6
5.8
6
93
0
61
17
28
34
20
1.95
2640--2715
26
2.8
26
78
4
71
56
10
1
31
1.41
5979--6033
16
3.5
16
75
5
58
20
0
9
70
1.13
7742--7793
21
2.4
22
81
12
63
42
3
0
53
1.19
7736--7786
18
3.0
16
78
18
50
52
1
0
45
1.12
9963--10059
23
4.2
21
70
25
72
14
28
19
37
1.91
9968--10087
25
5.0
24
75
14
99
15
29
18
36
1.92
9982--10086
48
2.2
48
85
8
142
13
31
18
37
1.89
11384--11458
32
2.4
30
78
14
82
41
0
1
57
1.07
16147--16194
9
5.3
9
80
7
53
72
4
22
0
1.01
16141--16194
13
4.6
12
77
13
51
74
3
22
0
0.98
25412--25475
31
2.1
30
85
5
85
51
12
1
34
1.49
26336--26409
26
2.9
25
85
2
94
37
14
2
44
1.60
26336--26412
13
5.9
14
79
15
76
37
15
3
42
1.65
32016--32089
22
3.2
22
76
14
85
45
24
20
9
1.80
32007--32085
26
3.2
26
77
14
103
40
22
25
11
1.87
35102--35140
19
2.0
20
85
9
55
48
0
5
46
1.24
35169--35231
21
3.1
21
71
13
60
36
3
3
57
1.31
37690--37794
43
2.4
43
80
3
113
50
14
10
24
1.74
47041--47070
12
2.5
12
100
0
60
63
6
23
6
1.43
47490--47577
22
3.8
22
86
6
113
12
21
22
43
1.86
48629--48911
107
2.7
107
89
0
406
35
21
18
24
1.95

Tables:   1

The End!