Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002919.1 Kokia drynarioides strain JFW-HI SEQ_115356, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53846

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
888--945
31
1.9
31
92
3
100
31
12
13
43
1.81
2545--2622
26
3.0
25
81
9
93
57
0
5
37
1.21
2553--2622
26
2.6
27
93
6
124
57
0
5
37
1.23
4339--4371
6
5.5
6
96
0
57
0
45
0
54
0.99
14747--14804
22
2.6
23
86
2
82
41
18
27
12
1.86
16763--16832
27
2.6
27
81
6
79
34
1
4
60
1.25
16798--16841
23
1.9
23
86
9
63
29
2
4
63
1.26
25068--25281
106
2.1
103
84
5
272
39
17
16
26
1.91
26856--26906
24
2.1
24
100
0
102
50
7
29
11
1.67
27505--27538
6
5.7
6
96
0
59
0
55
14
29
1.40
32584--32628
20
2.2
20
84
8
54
62
4
0
33
1.15
43170--43199
2
15.0
2
100
0
60
50
0
0
50
1.00
43822--43855
17
1.9
18
88
5
52
64
2
11
20
1.39
45017--45210
97
2.0
97
83
4
248
38
12
18
30
1.88
45469--45768
29
10.3
28
73
18
181
36
4
27
31
1.76
45468--45836
59
6.3
58
80
11
307
37
4
26
32
1.76
45474--45785
117
2.7
115
80
11
334
37
3
26
32
1.74
45616--45880
30
9.0
29
74
12
177
37
3
25
33
1.73
47017--47057
10
3.5
12
77
16
50
43
2
0
53
1.13
47016--47089
22
3.4
21
78
12
60
36
2
2
58
1.27
47746--47840
17
5.5
17
79
1
91
56
3
5
34
1.37
48721--48771
26
2.0
26
88
3
77
47
3
0
49
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49571--49603
16
2.0
17
88
5
50
42
3
0
54
1.15
50536--50561
13
2.0
13
100
0
52
92
0
7
0
0.39
50996--51074
24
3.5
24
69
22
80
65
8
11
13
1.46
50987--51074
43
2.0
43
100
0
176
65
9
11
13
1.46
51391--51421
4
7.8
4
100
0
62
77
0
0
22
0.77

Tables:   1

The End!