Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01002950.1 Kokia drynarioides strain JFW-HI SEQ_115415, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 762

Length: 1270
ACGTcount: A:0.40, C:0.11, G:0.10, T:0.39


Found at i:1199 original size:12 final size:13

Alignment explanation


    Indices: 1182--1211  Score: 53
    Period size: 12  Copynumber: 2.4  Consensus size: 13

       1172 GATTGAGCAT

                         
       1182 AATAATAATAAA-
          1 AATAATAATAAAC

                         
       1194 AATAATAATAAAC
          1 AATAATAATAAAC

                 
       1207 AATAA
          1 AATAA

       1212 ACACCTAAGT


Statistics
Matches: 17,  Mismatches: 0, Indels: 1
        0.94            0.00        0.06

Matches are distributed among these distances:
  12   12  0.71
  13    5  0.29

ACGTcount: A:0.73, C:0.03, G:0.00, T:0.23


Consensus pattern (13 bp):   
AATAATAATAAAC
Done.