Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01002968.1 Kokia drynarioides strain JFW-HI SEQ_115442, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80750

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7097--7158
31
2.0
31
96
0
115
35
14
9
40
1.79
8439--8473
16
2.2
16
89
0
52
51
5
8
34
1.56
9746--9792
22
2.1
22
85
14
62
27
0
0
72
0.85
11105--11172
21
3.1
22
74
16
61
42
5
2
48
1.42
31235--31276
22
1.9
22
85
0
57
57
2
16
23
1.51
31893--31947
23
2.4
23
75
3
58
50
5
7
36
1.53
33831--33863
7
4.7
7
100
0
66
24
0
0
75
0.80
34322--34353
4
8.0
4
100
0
64
25
0
25
50
1.50
38756--38781
12
2.2
12
100
0
52
0
7
0
92
0.39
41276--41316
19
2.2
19
91
4
66
56
7
0
36
1.27
41921--41959
13
3.0
13
82
14
53
35
7
20
35
1.81
42291--42332
20
2.1
20
100
0
84
57
4
9
28
1.51
42862--42899
13
2.9
13
81
14
51
34
0
0
65
0.93
44354--44378
2
12.5
2
100
0
50
52
0
0
48
1.00
44378--44411
2
17.0
2
100
0
68
50
0
50
0
1.00
47920--47961
19
2.3
18
88
8
66
38
0
9
52
1.34
48158--48238
29
2.7
29
84
5
99
50
13
4
30
1.63
49474--49518
24
1.9
23
86
4
63
48
2
2
46
1.26
49637--49691
23
2.4
23
88
11
78
56
9
5
29
1.53
53765--53832
24
2.8
24
81
0
82
55
7
8
27
1.57
54068--54132
20
3.4
19
80
8
69
50
9
0
40
1.34
54082--54133
19
2.7
19
82
8
61
51
7
0
40
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74821--74871
26
2.0
26
92
7
86
23
9
31
35
1.87
76152--76185
9
3.8
9
88
0
50
50
2
0
47
1.16
76431--76490
30
2.0
30
100
0
120
30
23
6
40
1.80
78735--78796
25
2.5
25
79
7
65
20
11
3
64
1.40
78721--78826
30
3.7
29
72
18
78
22
12
3
61
1.47
78902--78966
9
7.4
9
75
17
57
20
0
3
76
0.91
78913--78946
4
8.0
4
87
12
50
26
0
0
73
0.83
78902--78962
17
3.5
17
82
10
61
21
0
3
75
0.94
78907--78963
21
2.6
22
81
13
64
22
0
1
75
0.90
79116--79159
15
2.9
16
83
10
56
25
9
0
65
1.21

Tables:   1

The End!