Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01002975.1 Kokia drynarioides strain JFW-HI SEQ_115456, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 845

Length: 1409
ACGTcount: A:0.38, C:0.16, G:0.21, T:0.25


Found at i:1146 original size:13 final size:13

Alignment explanation


    Indices: 1130--1156  Score: 54
    Period size: 13  Copynumber: 2.1  Consensus size: 13

       1120 AATTGAGAAA

                         
       1130 AAAGAAAGAAAAG
          1 AAAGAAAGAAAAG

                         
       1143 AAAGAAAGAAAAG
          1 AAAGAAAGAAAAG

             
       1156 A
          1 A

       1157 GAAAAAAATA


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   14  1.00

ACGTcount: A:0.78, C:0.00, G:0.22, T:0.00


Consensus pattern (13 bp):   
AAAGAAAGAAAAG
Done.