Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003017.1 Kokia drynarioides strain JFW-HI SEQ_115532, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35923

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
265--1257
49
20.4
49
71
8
508
38
16
24
20
1.93
510--823
139
2.2
143
84
6
406
37
16
25
19
1.93
512--1345
147
5.7
144
75
11
555
38
16
24
20
1.93
722--1333
49
12.5
49
70
13
262
38
16
24
20
1.93
896--1309
98
4.2
98
82
3
465
38
16
24
20
1.92
1138--1371
49
4.8
49
70
11
122
38
16
25
19
1.92
3090--3116
2
13.5
2
100
0
54
48
0
0
51
1.00
3942--3968
2
13.5
2
100
0
54
48
0
0
51
1.00
11187--11221
17
2.1
17
89
10
54
28
0
5
65
1.15
12513--12540
2
14.0
2
100
0
56
50
0
0
50
1.00
13037--13122
33
2.6
33
78
10
95
56
6
6
29
1.52
13086--13173
26
3.2
28
81
13
94
59
7
3
29
1.42
19000--19049
21
2.4
21
93
0
82
28
20
24
28
1.99
21002--21054
26
2.0
26
92
0
88
45
20
9
24
1.81
24569--24615
21
2.2
22
81
11
53
29
6
8
55
1.55
25015--25124
53
2.2
49
80
6
112
30
2
10
55
1.49
25317--25798
84
5.9
82
76
9
292
30
12
11
45
1.77
25531--25827
82
3.7
78
79
6
251
32
10
11
46
1.73
31000--31053
20
2.9
17
80
17
63
64
1
0
33
1.04
32235--32466
57
4.1
55
75
10
182
36
27
4
31
1.78
32246--32444
29
6.9
28
78
7
179
35
28
5
30
1.80
32475--32539
30
2.2
30
85
0
85
36
16
3
43
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32484--32550
30
2.2
30
83
2
80
37
19
4
38
1.72
34118--34414
29
10.2
30
74
9
170
36
25
1
36
1.65
34114--34409
58
5.1
59
76
9
196
35
26
1
36
1.65
34685--34878
97
2.0
97
88
0
289
27
19
17
36
1.93

Tables:   1

The End!