Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003034.1 Kokia drynarioides strain JFW-HI SEQ_115556, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32026

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1008--1147
33
4.5
32
68
16
98
52
11
10
25
1.69
5049--5097
14
3.6
13
83
8
62
40
14
22
22
1.90
5059--5126
20
2.8
26
70
29
76
36
20
23
19
1.95
5073--5124
20
2.6
20
96
0
95
38
21
21
19
1.94
9751--9821
13
5.4
12
81
8
61
43
22
15
18
1.87
9763--9821
20
3.0
20
78
11
61
45
22
15
16
1.84
9751--9821
7
10.8
6
79
13
61
43
22
15
18
1.87
10888--10936
5
9.8
5
82
8
55
18
4
4
73
1.15
10887--10918
14
2.3
14
94
0
55
21
3
0
75
0.95
17909--17947
17
2.3
17
100
0
78
61
20
0
17
1.34
18252--18294
10
4.4
10
88
2
61
81
0
16
2
0.79
18252--18294
20
2.1
21
91
4
70
81
0
16
2
0.79
22687--22736
5
9.8
5
89
4
73
20
4
2
74
1.08
23593--23638
22
2.1
22
100
0
92
28
23
26
21
1.99
25777--25802
13
2.0
13
100
0
52
46
7
23
23
1.78
27614--27675
20
3.1
19
80
13
61
32
12
9
45
1.75
27636--27677
21
2.0
20
86
13
59
33
11
4
50
1.60
28292--28348
22
2.6
22
80
0
60
42
17
26
14
1.87
28336--28398
26
2.4
27
87
10
94
34
19
25
20
1.96

Tables:   1

The End!