Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003042.1 Kokia drynarioides strain JFW-HI SEQ_115568, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  109532

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
203--235
12
2.8
12
100
0
66
27
0
36
36
1.57
433--473
21
2.1
19
86
9
55
75
0
4
19
0.98
437--477
13
3.2
13
86
10
50
78
0
2
19
0.87
4551--4709
78
2.0
78
95
0
282
45
16
12
24
1.82
6552--7026
43
11.1
43
79
3
458
29
16
25
28
1.97
18954--19016
31
2.0
31
96
0
117
23
31
17
26
1.97
26719--26765
22
2.1
22
100
0
94
38
19
4
38
1.71
28196--28244
24
2.0
24
100
0
98
51
16
0
32
1.45
29147--29209
24
2.6
24
84
0
81
49
9
14
26
1.74
54282--54326
11
4.4
11
80
11
51
20
2
2
75
1.01
55399--55540
47
3.0
47
97
0
266
24
21
16
37
1.94
63343--63409
29
2.3
29
84
0
89
43
2
5
47
1.43
67342--67379
3
12.7
3
88
0
58
36
2
0
60
1.11
69462--69511
24
2.1
24
88
0
73
30
20
20
30
1.97
72100--72215
56
2.1
55
90
1
178
30
29
18
21
1.97
73083--73108
13
2.0
13
100
0
52
7
30
7
53
1.57
77607--77694
29
3.3
28
72
21
98
38
3
9
48
1.52
80755--80801
16
2.9
16
72
15
51
68
2
0
29
1.02
80735--80827
28
3.1
28
73
19
64
65
2
0
32
1.04
85065--85146
19
4.3
19
85
0
119
35
17
23
24
1.95
85068--85142
38
2.0
38
94
0
132
34
16
24
25
1.95
89210--89271
29
2.1
29
96
0
115
22
20
25
30
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93010--93752
101
7.4
100
83
6
923
26
17
18
37
1.93
93010--93751
200
3.7
201
86
3
1032
26
17
18
37
1.93
93380--93652
50
5.4
49
72
12
187
25
15
20
38
1.92
93010--93752
300
2.5
302
85
4
1038
26
17
18
37
1.93
98072--98101
14
2.2
14
94
5
53
30
23
10
36
1.87
107139--107165
2
13.5
2
100
0
54
0
0
48
51
1.00
109424--109464
20
2.0
21
85
9
57
58
2
2
36
1.24

Tables:   1

The End!