Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003048.1 Kokia drynarioides strain JFW-HI SEQ_115574, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58422

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--236
86
2.7
86
93
0
414
41
4
3
50
1.38
3489--3955
61
7.8
60
83
9
494
35
17
18
29
1.93
3488--3961
119
3.9
121
83
6
547
35
17
18
29
1.94
3863--4058
97
2.0
97
85
6
263
34
16
17
31
1.93
3828--4114
155
1.9
154
80
10
345
33
17
19
29
1.95
3623--4230
333
1.8
336
84
7
842
34
17
18
29
1.94
3963--4244
117
2.4
118
85
5
354
35
15
20
28
1.93
3782--4477
283
2.5
272
85
7
916
35
16
19
28
1.94
4246--4555
117
2.6
116
90
2
467
39
15
19
26
1.91
4267--4556
57
4.9
61
77
9
289
38
14
19
27
1.91
5356--5391
15
2.4
15
90
0
54
55
0
0
44
0.99
11187--11231
3
15.0
3
90
0
72
31
2
2
64
1.18
16065--16116
20
2.8
19
78
21
65
50
5
1
42
1.37
16529--16568
19
2.1
19
95
0
71
50
10
17
22
1.76
25478--25522
20
2.2
21
84
4
56
48
2
2
46
1.26
28271--28323
2
26.5
2
96
0
97
1
47
0
50
1.12
28900--29253
176
2.0
176
99
0
699
27
13
18
40
1.88
39833--39860
6
4.7
6
100
0
56
35
64
0
0
0.94
46978--47011
2
17.0
2
93
0
59
47
0
2
50
1.16
46999--47044
23
2.1
21
84
8
56
36
2
4
56
1.31
49607--49648
19
2.2
19
100
0
84
16
14
42
26
1.86

Tables:   1

The End!