Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003069.1 Kokia drynarioides strain JFW-HI SEQ_115609, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88321

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7194--7366
91
1.9
92
82
5
217
36
12
16
34
1.86
9491--9516
3
8.7
3
100
0
52
69
0
0
30
0.89
12048--12073
13
2.0
13
100
0
52
23
0
7
69
1.14
14760--14816
23
2.5
23
97
0
105
28
28
22
21
1.99
17720--17768
23
2.1
24
84
3
64
28
18
6
46
1.72
19634--19744
55
2.0
55
100
0
222
36
16
18
29
1.92
21526--21565
20
2.0
20
100
0
80
30
20
20
30
1.97
24208--24242
18
1.9
18
100
0
70
11
28
11
48
1.74
24891--25139
116
2.2
114
85
3
338
36
26
9
28
1.88
26676--26741
32
2.1
32
94
0
114
37
6
6
50
1.52
43736--43847
20
5.7
19
75
17
88
11
33
22
33
1.90
43729--43847
40
3.0
40
90
2
179
11
32
21
33
1.90
44235--44280
21
2.3
21
85
7
60
23
0
28
47
1.52
47274--47317
22
2.0
23
86
4
63
75
0
0
25
0.81
51349--51388
21
1.9
21
85
10
55
37
2
32
27
1.70
65527--65568
21
1.9
23
85
9
61
35
2
0
61
1.09
67450--67489
20
1.9
22
85
10
57
50
2
0
47
1.14
70123--70175
21
2.6
19
83
16
70
28
13
26
32
1.93
71757--71785
3
9.7
3
100
0
58
65
0
0
34
0.93
71910--71947
19
2.0
19
100
0
76
26
10
5
57
1.53
72085--72122
12
3.1
12
92
3
58
7
36
0
55
1.29
73280--73310
3
10.3
3
100
0
62
67
0
0
32
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77461--77498
20
2.1
19
85
14
53
42
10
0
47
1.38
78814--78844
6
5.2
6
100
0
62
16
0
35
48
1.46
86918--86967
19
2.8
17
82
8
64
70
0
0
30
0.88
86918--86968
9
5.6
9
75
11
50
70
0
0
29
0.87
87509--87561
22
2.4
22
75
12
63
37
1
5
54
1.35

Tables:   1

The End!