Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003096.1 Kokia drynarioides strain JFW-HI SEQ_115658, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31959

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86--130
20
2.2
20
84
7
56
2
13
0
84
0.72
89--130
11
3.5
11
84
15
57
2
11
0
85
0.68
4191--4229
19
2.1
19
85
0
51
48
0
0
51
1.00
5021--5045
2
12.5
2
100
0
50
48
0
0
52
1.00
5569--5606
16
2.2
17
86
9
51
44
5
5
44
1.49
5627--5801
41
4.3
41
84
3
219
22
29
16
32
1.95
5645--5796
83
1.9
81
90
2
241
23
30
14
31
1.94
6953--6991
20
1.9
21
84
5
53
41
0
0
58
0.98
7127--7228
27
3.5
31
70
16
90
26
13
11
48
1.77
7127--7311
60
3.1
58
83
6
221
25
13
12
48
1.78
7520--7654
31
4.5
30
73
15
100
51
10
8
28
1.66
13426--13459
17
1.9
18
88
5
52
73
2
2
20
1.09
14421--14488
34
2.0
32
81
13
75
27
4
2
64
1.27
19394--19447
16
3.4
16
67
23
51
37
9
0
53
1.33
19395--19451
19
3.4
19
64
31
56
35
8
0
56
1.31
19469--19524
17
3.4
16
75
9
60
41
1
0
57
1.09
20890--20939
17
3.2
16
75
10
50
66
0
18
16
1.26
23070--23181
56
2.0
56
92
0
188
39
20
11
28
1.88
24295--24347
25
2.1
26
89
3
81
66
9
7
16
1.43
24872--24920
23
2.1
23
81
7
55
57
16
4
22
1.56
25475--25515
21
2.0
20
86
13
57
65
4
0
29
1.13
26581--26610
14
2.1
15
93
6
53
23
0
0
76
0.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28390--28551
59
2.8
58
86
1
173
37
11
24
25
1.90
28316--28553
29
8.2
28
65
17
94
34
10
27
27
1.90
28407--28730
59
5.5
57
79
9
237
36
9
25
29
1.87
28533--28833
29
10.3
27
71
17
108
36
4
27
31
1.77
28546--28779
30
8.0
28
69
21
99
36
5
25
32
1.80
28744--28857
57
2.0
58
86
5
160
35
0
29
33
1.64
28621--28843
29
7.7
29
72
13
129
37
3
27
31
1.74
28745--28857
29
3.9
29
83
8
140
36
0
30
32
1.64
30729--30851
17
7.4
17
73
16
96
54
4
0
40
1.25
30749--30815
29
2.3
29
84
0
80
59
4
1
34
1.26
30776--30851
36
2.1
35
85
7
100
57
2
0
39
1.12
30729--30852
65
1.9
64
83
4
160
54
4
0
40
1.25
31745--31825
23
3.6
22
84
3
99
39
28
19
12
1.88
31809--31866
23
2.5
23
77
2
62
43
20
24
12
1.86

Tables:   1

The End!