Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003105.1 Kokia drynarioides strain JFW-HI SEQ_115673, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79597

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
444--498
17
3.2
16
82
10
65
38
1
5
54
1.34
422--498
34
2.3
34
84
8
95
37
1
6
54
1.35
453--498
17
2.7
17
86
6
67
43
0
4
52
1.21
464--510
23
2.0
24
88
8
71
44
0
4
51
1.21
2241--2853
30
20.7
30
74
9
465
36
27
2
33
1.72
2241--2853
59
10.4
59
81
4
574
36
27
2
33
1.72
4633--4673
21
1.9
22
90
5
66
51
39
2
7
1.43
14337--14387
21
2.5
20
78
9
57
27
19
25
27
1.99
22614--22653
16
2.5
16
95
0
71
47
0
5
47
1.24
23318--23373
3
18.7
3
96
0
103
33
0
0
66
0.92
30453--30497
23
2.0
23
86
0
63
26
4
28
40
1.75
41436--41498
29
2.2
28
86
11
83
46
0
3
50
1.17
41608--41697
39
2.3
38
86
5
128
38
2
3
55
1.29
42224--42295
30
2.4
31
85
2
92
45
18
15
20
1.85
42859--42897
12
3.2
12
81
0
51
71
5
2
20
1.17
45188--45251
15
4.5
14
80
7
76
29
14
18
37
1.90
45191--45251
29
2.1
28
87
3
86
29
14
19
36
1.92
51761--51792
17
1.9
17
93
6
57
28
6
21
43
1.77
52306--52361
15
3.7
15
75
2
58
30
8
19
41
1.82
52310--52367
30
2.0
29
86
10
82
36
10
17
36
1.84
55297--55445
81
1.8
81
85
2
210
16
19
20
43
1.88
55274--55470
81
2.4
81
78
1
180
16
20
20
43
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63421--63535
58
2.0
59
94
1
205
28
2
29
39
1.70
63421--63534
29
3.9
29
87
6
169
28
2
28
39
1.70
64474--64516
20
2.2
20
87
8
61
27
0
0
72
0.85
64476--64523
18
2.5
20
80
10
55
31
0
0
68
0.90
65191--65264
6
13.0
6
71
16
59
56
2
1
39
1.22
65191--65246
17
3.4
17
92
2
87
55
1
1
41
1.21
65191--65266
17
4.8
16
78
16
79
56
2
1
39
1.21
68483--68508
8
3.2
8
100
0
52
46
11
11
30
1.76
69161--69348
97
1.9
96
81
7
220
34
14
22
28
1.93
69637--69706
29
2.4
30
85
4
97
35
4
27
32
1.76
69654--69813
59
2.7
57
81
11
189
33
4
30
31
1.77
69655--69802
29
5.0
30
89
3
178
31
4
31
33
1.76
71536--71650
58
2.0
59
94
1
205
28
2
29
39
1.70
71536--71649
29
3.9
29
87
6
169
28
2
28
39
1.70
72589--72631
20
2.2
20
87
8
61
27
0
0
72
0.85
72591--72638
18
2.5
20
80
10
55
31
0
0
68
0.90
73306--73379
6
13.0
6
71
16
59
56
2
1
39
1.22
73306--73361
17
3.4
17
92
2
87
55
1
1
41
1.21
73306--73381
17
4.8
16
78
16
79
56
2
1
39
1.21
76598--76623
8
3.2
8
100
0
52
46
11
11
30
1.76
77276--77463
97
1.9
96
81
7
220
34
14
22
28
1.93
77773--78148
29
12.8
28
82
8
358
31
4
29
34
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77765--78149
59
6.6
58
85
6
456
31
4
29
34
1.78
77773--78153
117
3.2
115
86
4
519
31
4
30
33
1.78
79161--79215
3
17.7
3
88
7
83
36
0
0
63
0.95

Tables:   1

The End!