Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003109.1 Kokia drynarioides strain JFW-HI SEQ_115679, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34787

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1860--2201
29
11.8
28
70
16
157
33
5
26
35
1.79
1919--2203
88
3.3
83
77
11
254
32
4
25
36
1.77
1954--2259
59
5.2
59
78
10
272
34
3
23
37
1.73
1920--2259
29
11.6
28
76
14
246
33
4
24
37
1.75
1984--2259
145
1.9
144
83
8
355
34
3
24
38
1.72
3870--3938
17
4.1
17
88
0
102
57
2
1
37
1.22
3869--3942
6
12.8
6
71
8
55
58
2
1
37
1.21
4164--4192
5
6.0
5
92
8
51
20
0
0
79
0.74
8540--8665
66
1.9
66
98
0
243
36
4
31
26
1.78
15679--15772
42
2.2
42
94
0
170
34
2
7
56
1.39
15871--15914
23
2.0
22
86
8
63
43
0
6
50
1.29
19893--19996
23
4.4
23
75
11
77
12
20
21
46
1.83
23091--23245
78
2.0
79
92
2
260
26
15
13
44
1.83
26209--26296
31
2.8
31
81
6
90
38
12
9
39
1.75
28276--28326
26
1.9
27
84
11
70
49
0
41
9
1.36
30131--30325
91
2.1
91
82
8
227
46
13
15
24
1.82
30205--30325
33
3.9
32
70
22
96
47
11
14
25
1.78
30563--30625
32
2.0
32
93
0
108
30
19
26
23
1.98
31701--31734
18
1.9
17
88
5
50
35
0
2
61
1.11
32870--32901
16
1.9
17
93
6
57
25
0
6
68
1.12
34034--34077
20
2.2
20
88
8
63
61
2
0
36
1.09
34034--34094
20
3.3
18
74
21
54
60
1
1
36
1.16

Tables:   1

The End!