Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003116.1 Kokia drynarioides strain JFW-HI SEQ_115689, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12584

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
187--220
12
2.8
12
86
0
50
79
2
17
0
0.86
642--677
18
2.1
18
89
5
56
41
0
25
33
1.55
3138--3192
18
3.2
18
80
14
62
50
1
0
47
1.11
7408--7469
30
2.1
30
87
3
90
33
22
4
38
1.76
11141--11256
30
3.9
30
71
8
94
40
5
24
30
1.77
11027--11253
59
3.9
57
82
5
274
37
6
24
30
1.81
11132--11221
29
3.1
29
70
3
99
37
8
22
31
1.85
11027--11241
118
1.8
117
86
3
315
38
6
25
29
1.82
11237--11341
28
3.7
29
75
11
108
44
2
18
34
1.64
11207--11344
57
2.4
58
86
6
190
41
2
21
35
1.65
11201--11344
29
5.0
29
77
12
136
40
2
22
34
1.66
12410--12434
13
1.9
13
100
0
50
32
0
0
68
0.90
12396--12440
23
2.0
24
91
8
76
35
0
0
64
0.94
12401--12451
23
2.3
22
86
3
66
35
1
1
60
1.19
12456--12505
15
3.3
15
82
2
55
42
4
0
54
1.19

Tables:   1

The End!