Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003145.1 Kokia drynarioides strain JFW-HI SEQ_115728, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49543

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7655--7744
45
2.0
45
93
0
153
27
14
15
42
1.86
16440--16511
35
2.1
35
94
0
126
45
22
11
20
1.82
17693--17749
27
2.2
27
81
12
66
40
0
0
59
0.97
17789--17823
15
2.4
15
90
4
54
65
0
0
34
0.93
18913--18995
34
2.4
36
82
11
93
46
1
0
51
1.08
21472--21519
24
2.1
23
85
11
64
60
4
0
35
1.16
21468--21540
22
3.5
21
75
15
62
49
2
0
47
1.15
21501--21530
15
1.9
16
93
6
53
46
0
0
53
1.00
22620--22660
22
2.0
20
85
9
55
58
7
2
31
1.38
23663--23698
7
5.1
7
96
0
63
2
44
13
38
1.59
26729--26761
16
2.0
17
88
5
50
45
0
6
48
1.27
29758--29817
28
2.1
28
87
0
84
26
8
26
38
1.85
29835--30088
59
4.3
58
82
6
228
38
6
22
32
1.79
29892--30052
29
5.5
29
75
14
143
34
4
26
34
1.78
29892--30092
30
6.8
29
74
14
153
34
5
24
34
1.80
35558--36226
206
3.3
206
83
4
843
36
18
23
22
1.95
36514--36593
11
7.0
11
76
12
72
41
1
2
55
1.21
36514--36574
17
3.6
17
86
0
86
40
0
3
55
1.16
36515--36594
23
3.5
23
79
3
81
42
1
2
53
1.22
36514--36594
6
14.0
6
75
12
80
41
1
2
54
1.21
36514--36594
17
4.7
17
85
1
81
41
1
2
54
1.21
36606--36634
14
2.0
15
93
6
51
51
20
6
20
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47199--47225
4
6.8
4
100
0
54
77
0
22
0
0.76

Tables:   1

The End!