Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01003146.1 Kokia drynarioides strain JFW-HI SEQ_115729, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 826

Length: 1377
ACGTcount: A:0.28, C:0.24, G:0.13, T:0.35


Found at i:924 original size:5 final size:5

Alignment explanation


    Indices: 914--941  Score: 56
    Period size: 5  Copynumber: 5.6  Consensus size: 5

        904 CTTGATATTT

                                             
        914 TTTGC TTTGC TTTGC TTTGC TTTGC TTT
          1 TTTGC TTTGC TTTGC TTTGC TTTGC TTT

        942 CCCCATAGGA


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   5   23  1.00

ACGTcount: A:0.00, C:0.18, G:0.18, T:0.64


Consensus pattern (5 bp):   
TTTGC

Done.