Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003151.1 Kokia drynarioides strain JFW-HI SEQ_115737, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43584

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
679--708
16
1.9
16
93
6
53
16
13
0
70
1.18
674--734
22
2.8
22
87
7
72
14
11
1
72
1.20
688--734
21
2.2
22
92
3
78
14
8
2
74
1.15
1703--1741
18
2.2
17
86
4
51
48
0
0
51
1.00
14887--14930
22
2.0
22
100
0
88
22
18
13
45
1.84
15061--15101
21
2.0
21
95
0
73
21
12
12
53
1.70
15475--15544
20
3.6
19
81
11
72
35
2
5
55
1.38
15933--15989
15
3.8
15
80
0
78
24
28
26
21
1.99
15928--15987
30
2.0
30
93
0
102
26
25
28
20
1.99
15933--16018
45
1.9
45
82
0
109
27
25
24
22
1.99
18335--18381
20
2.3
21
81
3
60
76
2
14
6
1.08
18356--18397
16
2.5
17
84
3
59
71
2
19
7
1.20
18269--18446
99
1.8
94
82
8
223
64
1
21
12
1.36
20759--20858
15
6.7
15
71
6
78
25
23
28
24
2.00
20759--20858
44
2.2
45
84
5
123
25
23
28
24
2.00
22066--22167
51
2.0
51
100
0
204
25
25
17
31
1.97
25430--25515
43
2.0
43
95
0
154
36
12
5
45
1.67
37330--37519
94
2.0
94
97
0
362
34
21
3
41
1.69
37508--37553
23
2.0
22
87
4
65
10
26
10
52
1.69
43439--43477
12
3.2
12
81
0
51
46
0
28
25
1.53
43435--43496
18
3.5
17
78
6
54
48
0
22
29
1.51

Tables:   1

The End!