Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01003167.1 Kokia drynarioides strain JFW-HI SEQ_115765, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 9389
ACGTcount: A:0.33, C:0.19, G:0.13, T:0.35


Found at i:2364 original size:6 final size:6

Alignment explanation


    Indices: 2353--2379  Score: 54
    Period size: 6  Copynumber: 4.5  Consensus size: 6

       2343 TAATTAAAAT

                                           
       2353 ATTTTC ATTTTC ATTTTC ATTTTC ATT
          1 ATTTTC ATTTTC ATTTTC ATTTTC ATT

       2380 ACAATTTCAT


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   21  1.00

ACGTcount: A:0.19, C:0.15, G:0.00, T:0.67


Consensus pattern (6 bp):   
ATTTTC

Done.