Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01000317.1 Kokia drynarioides strain JFW-HI SEQ_111080, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 705

Length: 1175
ACGTcount: A:0.36, C:0.14, G:0.11, T:0.39


Found at i:801 original size:3 final size:3

Alignment explanation


    Indices: 793--817  Score: 50
    Period size: 3  Copynumber: 8.3  Consensus size: 3

        783 CATAAAGCCG

                                             
        793 ATT ATT ATT ATT ATT ATT ATT ATT A
          1 ATT ATT ATT ATT ATT ATT ATT ATT A

        818 ATTTCCCATT


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   22  1.00

ACGTcount: A:0.36, C:0.00, G:0.00, T:0.64


Consensus pattern (3 bp):   
ATT

Done.