Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003171.1 Kokia drynarioides strain JFW-HI SEQ_115773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40302

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2229--2291
24
2.6
24
87
0
90
49
12
14
23
1.78
4210--4270
24
2.5
24
81
0
68
50
11
11
26
1.72
4536--4573
20
1.9
20
88
0
58
31
5
15
47
1.68
4861--4913
10
5.6
9
85
12
63
30
0
1
67
1.01
4860--4904
20
2.2
20
92
0
72
31
0
0
68
0.89
8983--9012
2
15.0
2
100
0
60
50
0
0
50
1.00
10915--10996
40
2.0
40
100
0
164
46
13
18
21
1.83
12330--12722
30
13.1
31
79
6
278
39
27
2
30
1.68
12334--12659
30
10.8
29
81
4
303
40
26
1
30
1.65
12330--12661
91
3.7
89
80
7
291
40
27
1
30
1.67
18427--18504
40
2.0
39
100
0
147
20
0
12
65
1.25
19206--19238
2
17.0
2
93
6
59
51
0
0
48
1.00
19598--19622
11
2.3
11
100
0
50
60
8
0
32
1.26
23312--23376
35
1.9
33
82
14
80
44
3
4
47
1.39
31857--31898
17
2.5
17
84
0
57
42
2
2
52
1.27
32714--32781
3
22.0
3
76
8
57
58
2
0
38
1.13
33862--34143
29
9.6
29
69
12
123
32
25
3
39
1.72
33862--34144
58
4.8
58
75
8
191
32
25
3
39
1.72
33869--34144
117
2.4
117
77
7
294
32
25
2
39
1.71
33869--34171
59
5.2
58
73
9
174
32
25
3
38
1.73
34128--34189
28
2.2
28
82
0
79
33
25
11
29
1.91
34404--34597
97
2.0
97
85
6
259
30
16
14
38
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37019--37079
31
2.0
31
90
0
95
31
16
21
31
1.95
37037--37103
31
2.1
31
83
8
82
32
17
19
29
1.95
37992--38028
15
2.5
15
100
0
74
40
8
18
32
1.80

Tables:   1

The End!