Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003182.1 Kokia drynarioides strain JFW-HI SEQ_115790, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  147936

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36--73
2
19.0
2
100
0
76
50
0
0
50
1.00
4297--4364
30
2.2
31
89
2
102
45
5
8
39
1.60
10063--10130
29
2.3
29
100
0
136
33
22
11
32
1.90
14360--14520
83
1.9
83
83
2
207
27
23
19
28
1.99
16839--16891
24
2.2
24
90
3
81
26
5
9
58
1.52
17176--17214
16
2.4
17
91
4
62
61
2
5
30
1.31
17402--17467
30
2.2
30
83
2
80
46
4
3
45
1.38
18748--18792
14
3.1
14
76
17
56
62
6
0
31
1.21
39963--39991
14
2.1
14
100
0
58
0
6
0
93
0.36
40315--40349
6
5.8
6
100
0
70
14
0
51
34
1.42
45867--45922
6
8.7
6
85
14
76
17
16
0
66
1.26
45867--45918
14
3.9
14
95
5
90
19
15
0
65
1.27
45867--45922
20
2.8
19
85
15
78
17
16
0
66
1.26
46431--46490
32
1.9
30
83
12
77
40
6
11
41
1.68
56471--56511
22
1.9
22
90
5
66
65
2
0
31
1.05
56963--56997
18
1.9
18
88
0
52
42
5
5
45
1.51
58741--58771
3
10.3
3
92
0
53
70
0
29
0
0.87
60680--60710
16
1.9
16
93
0
53
48
9
6
35
1.62
60871--60915
18
2.3
20
82
17
60
35
0
4
60
1.17
63058--63082
2
12.5
2
100
0
50
0
52
0
48
1.00
64535--64560
2
13.0
2
100
0
52
50
0
0
50
1.00
85021--85075
19
2.8
20
78
13
62
43
1
7
47
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90840--90878
21
1.9
21
89
5
62
12
25
0
61
1.31
96661--96689
2
14.5
2
100
0
58
51
0
0
48
1.00
98474--98511
6
6.3
6
93
0
58
0
15
68
15
1.22
99911--100063
78
1.9
79
94
1
272
45
13
15
24
1.83
106456--106493
17
2.3
17
86
4
51
68
0
0
31
0.90
112131--112189
31
1.9
31
82
6
75
38
13
6
40
1.71
123548--123573
11
2.4
11
100
0
52
53
7
0
38
1.30
123952--123977
4
6.5
4
100
0
52
53
0
0
46
1.00
130658--130691
2
17.0
2
93
0
59
50
2
0
47
1.16
135773--135810
2
18.5
2
94
5
67
47
0
2
50
1.15
143223--143370
78
1.9
79
88
2
226
39
14
16
29
1.88
146216--146242
14
1.9
14
100
0
54
0
0
7
92
0.38

Tables:   1

The End!